node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA84666.1 | rpmC | SAMN02745178_01444 | SAMN02745178_00552 | Helix-turn-helix domain-containing protein. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.836 |
SKA84666.1 | rpsB | SAMN02745178_01444 | SAMN02745178_01080 | Helix-turn-helix domain-containing protein. | Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.829 |
SKA84666.1 | rpsC | SAMN02745178_01444 | SAMN02745178_00550 | Helix-turn-helix domain-containing protein. | Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.885 |
SKA84666.1 | rpsD | SAMN02745178_01444 | SAMN02745178_00571 | Helix-turn-helix domain-containing protein. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.850 |
SKA84666.1 | rpsE | SAMN02745178_01444 | SAMN02745178_00561 | Helix-turn-helix domain-containing protein. | Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.854 |
SKA84666.1 | rpsG | SAMN02745178_01444 | SAMN02745178_01289 | Helix-turn-helix domain-containing protein. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.834 |
SKA84666.1 | rpsJ | SAMN02745178_01444 | SAMN02745178_00543 | Helix-turn-helix domain-containing protein. | Small subunit ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.848 |
SKA84666.1 | rpsM | SAMN02745178_01444 | SAMN02745178_00569 | Helix-turn-helix domain-containing protein. | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.832 |
SKA84666.1 | rpsO | SAMN02745178_01444 | SAMN02745178_01316 | Helix-turn-helix domain-containing protein. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.832 |
SKA84666.1 | rpsS | SAMN02745178_01444 | SAMN02745178_00548 | Helix-turn-helix domain-containing protein. | Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.861 |
rpmC | SKA84666.1 | SAMN02745178_00552 | SAMN02745178_01444 | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | Helix-turn-helix domain-containing protein. | 0.836 |
rpmC | rpsB | SAMN02745178_00552 | SAMN02745178_01080 | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.996 |
rpmC | rpsC | SAMN02745178_00552 | SAMN02745178_00550 | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rpmC | rpsD | SAMN02745178_00552 | SAMN02745178_00571 | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.997 |
rpmC | rpsE | SAMN02745178_00552 | SAMN02745178_00561 | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.998 |
rpmC | rpsG | SAMN02745178_00552 | SAMN02745178_01289 | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.997 |
rpmC | rpsJ | SAMN02745178_00552 | SAMN02745178_00543 | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | Small subunit ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.998 |
rpmC | rpsM | SAMN02745178_00552 | SAMN02745178_00569 | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.997 |
rpmC | rpsO | SAMN02745178_00552 | SAMN02745178_01316 | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.996 |
rpmC | rpsS | SAMN02745178_00552 | SAMN02745178_00548 | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |