STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA86928.1Ca2+/Na+ antiporter. (362 aa)    
Predicted Functional Partners:
SKA85731.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.763
SKA80234.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.739
SKA73064.1
SGNH hydrolase-like domain-containing protein, acetyltransferase AlgX.
  
     0.730
SKA75818.1
SpoIID/LytB domain protein; Belongs to the CinA family.
  
     0.725
SKA75188.1
Ig-like domain (group 2).
  
    0.714
SKA76021.1
Transcriptional attenuator, LytR family.
  
     0.695
SKA73345.1
Predicted membrane protein.
  
     0.689
SKA73917.1
Hypothetical protein.
  
    0.666
SKA83488.1
Hypothetical protein.
  
    0.665
SKA74269.1
Fucose 4-O-acetylase.
  
     0.648
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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