Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA87124.1 | SKA87130.1 | SAMN02745178_01689 | SAMN02745178_01690 | Protein of unknown function. | Type IV secretory pathway, VirB4 component. | 0.813 |
SKA87124.1 | SKA87134.1 | SAMN02745178_01689 | SAMN02745178_01691 | Protein of unknown function. | PrgI family protein. | 0.813 |
SKA87124.1 | SKA87138.1 | SAMN02745178_01689 | SAMN02745178_01692 | Protein of unknown function. | Hypothetical protein. | 0.773 |
SKA87124.1 | SKA87147.1 | SAMN02745178_01689 | SAMN02745178_01693 | Protein of unknown function. | Predicted nucleotidyltransferase component of viral defense system. | 0.773 |
SKA87124.1 | SKA87153.1 | SAMN02745178_01689 | SAMN02745178_01694 | Protein of unknown function. | Transcriptional regulator, AbiEi antitoxin, Type IV TA system. | 0.773 |
SKA87124.1 | SKA87160.1 | SAMN02745178_01689 | SAMN02745178_01695 | Protein of unknown function. | TrbC/VIRB2 family protein. | 0.554 |
SKA87124.1 | SKA87166.1 | SAMN02745178_01689 | SAMN02745178_01696 | Protein of unknown function. | Type IV secretion system protein VirD4. | 0.606 |
SKA87124.1 | SKA87171.1 | SAMN02745178_01689 | SAMN02745178_01697 | Protein of unknown function. | Hypothetical protein. | 0.554 |
SKA87124.1 | SKA87178.1 | SAMN02745178_01689 | SAMN02745178_01698 | Protein of unknown function. | Protein of unknown function. | 0.554 |
SKA87124.1 | SKA87185.1 | SAMN02745178_01689 | SAMN02745178_01699 | Protein of unknown function. | Relaxase/Mobilisation nuclease domain-containing protein. | 0.554 |
SKA87130.1 | SKA87124.1 | SAMN02745178_01690 | SAMN02745178_01689 | Type IV secretory pathway, VirB4 component. | Protein of unknown function. | 0.813 |
SKA87130.1 | SKA87134.1 | SAMN02745178_01690 | SAMN02745178_01691 | Type IV secretory pathway, VirB4 component. | PrgI family protein. | 0.891 |
SKA87130.1 | SKA87138.1 | SAMN02745178_01690 | SAMN02745178_01692 | Type IV secretory pathway, VirB4 component. | Hypothetical protein. | 0.927 |
SKA87130.1 | SKA87147.1 | SAMN02745178_01690 | SAMN02745178_01693 | Type IV secretory pathway, VirB4 component. | Predicted nucleotidyltransferase component of viral defense system. | 0.773 |
SKA87130.1 | SKA87153.1 | SAMN02745178_01690 | SAMN02745178_01694 | Type IV secretory pathway, VirB4 component. | Transcriptional regulator, AbiEi antitoxin, Type IV TA system. | 0.773 |
SKA87130.1 | SKA87160.1 | SAMN02745178_01690 | SAMN02745178_01695 | Type IV secretory pathway, VirB4 component. | TrbC/VIRB2 family protein. | 0.691 |
SKA87130.1 | SKA87166.1 | SAMN02745178_01690 | SAMN02745178_01696 | Type IV secretory pathway, VirB4 component. | Type IV secretion system protein VirD4. | 0.896 |
SKA87130.1 | SKA87171.1 | SAMN02745178_01690 | SAMN02745178_01697 | Type IV secretory pathway, VirB4 component. | Hypothetical protein. | 0.554 |
SKA87130.1 | SKA87178.1 | SAMN02745178_01690 | SAMN02745178_01698 | Type IV secretory pathway, VirB4 component. | Protein of unknown function. | 0.688 |
SKA87130.1 | SKA87185.1 | SAMN02745178_01690 | SAMN02745178_01699 | Type IV secretory pathway, VirB4 component. | Relaxase/Mobilisation nuclease domain-containing protein. | 0.848 |
page 1 of 6