STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA87261.1Adenine-specific DNA methylase, N12 class. (2115 aa)    
Predicted Functional Partners:
SKA74429.1
Type I restriction enzyme, S subunit.
  
 
 0.949
SKA74439.1
Type I restriction enzyme, R subunit.
  
 
 0.825
SKA87019.1
Protein of unknown function.
  
 
 0.825
SKA90609.1
Type IV secretory pathway, VirB4 component.
 
     0.653
SKA93858.1
Hypothetical protein.
 
     0.641
SKA87185.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
     0.639
SKA95386.1
Type IV secretory pathway, VirB4 component.
 
     0.615
SKA94107.1
Hypothetical protein.
 
     0.614
SKA87268.1
Transposon-encoded protein TnpV.
       0.610
SKA94131.1
Type IV secretory system Conjugative DNA transfer.
 
     0.610
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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