STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA88072.1Amino acid-binding domain sensor hybrid histidine kinase. (939 aa)    
Predicted Functional Partners:
SKA92719.1
Hypothetical protein.
  
 0.960
SKA85646.1
Signal transduction histidine kinase.
 
0.903
SKA85652.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
 
  0.857
SKA75326.1
Signal transduction histidine kinase.
 
0.805
SKA93274.1
Response regulator receiver domain-containing protein.
 
0.724
SKA93619.1
Signal transduction histidine kinase.
 
0.714
SKA89848.1
Putative two-component system response regulator.
0.639
SKA85656.1
Putative two-component system response regulator.
0.637
SKA89924.1
Hypothetical protein.
  
     0.551
SKA93065.1
Signal transduction histidine kinase.
  
  
0.532
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.