STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA88667.1PTS system, galactosamine-specific IIC component. (266 aa)    
Predicted Functional Partners:
SKA88661.1
PTS system, galactosamine-specific IID component.
 0.999
SKA88674.1
PTS system, galactosamine-specific IIB component.
 
 0.999
SKA88638.1
PTS system, N-acetylgalactosamine-specific IIA component.
 
 0.997
SKA73653.1
PTS system, fructose-specific IIC component.
  
 
 0.956
SKA79072.1
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
  
 
 0.956
SKA91510.1
PTS system, fructose-specific IIC component.
  
 
 0.956
SKA88655.1
Fructoselysine-6-P-deglycase FrlB with duplicated sugar isomerase (SIS) domain.
 
  
 0.853
SKA89870.1
Mannose-6-phosphate isomerase, type 1.
    
 0.812
SKA97174.1
Mannose-6-phosphate isomerase.
    
 0.812
SKA74053.1
Phosphocarrier protein.
    
 0.755
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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