STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA88680.1SIS domain-containing protein. (374 aa)    
Predicted Functional Partners:
SKA94758.1
Glutamate synthase (ferredoxin).
   
 0.929
SKA96564.1
PTS system, D-glucosamine-specific IIC component.
    
 0.912
SKA82708.1
Phosphoribosylformylglycinamidine synthase.
    
 0.894
SKA88655.1
Fructoselysine-6-P-deglycase FrlB with duplicated sugar isomerase (SIS) domain.
 
 
 0.866
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
 
 0.856
SKA87842.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.839
SKA97174.1
Mannose-6-phosphate isomerase.
 
 
 0.834
SKA77709.1
Mannose-1-phosphate guanylyltransferase.
    
  0.822
SKA89870.1
Mannose-6-phosphate isomerase, type 1.
  
 
 0.807
SKA92742.1
PTS system N-acetylglucosamine-specific IIB component, Glc family /PTS system N-acetylglucosamine-specific IIC component, Glc family.
    
 0.804
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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