STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA88958.1Glutamate synthase (NADPH/NADH) small chain. (465 aa)    
Predicted Functional Partners:
SKA88952.1
ferredoxin--NADP+ reductase.
 0.999
SKA94758.1
Glutamate synthase (ferredoxin).
 
 0.999
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 0.979
SKA92366.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
 
 
 0.930
SKA73459.1
Dihydroorotate dehydrogenase electron transfer subunit.
 0.915
SKA89542.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.908
SKA77498.1
[FeFe] hydrogenase, group B1/B3.
 
 0.902
SKA92781.1
Glutamine synthetase.
  
 
 0.845
SKA94763.1
Glutamate synthase (NADPH/NADH) small chain.
  
  
 
0.844
SKA83360.1
Glutamate synthase (NADPH/NADH) small chain.
  
  
 
0.836
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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