STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA91547.1Hypothetical protein. (368 aa)    
Predicted Functional Partners:
SKA91553.1
ABC-2 type transport system ATP-binding protein.
 
  0.976
SKA96896.1
ABC-type multidrug transport system, ATPase component.
 
  0.840
SKA98220.1
ABC-type multidrug transport system, ATPase component.
 
  0.836
SKA79325.1
ABC-type multidrug transport system, ATPase component.
 
  0.835
SKA97796.1
ABC-type multidrug transport system, ATPase component.
 
  0.827
SKA91561.1
Hypothetical protein.
       0.800
SKA98133.1
ABC-2 type transport system ATP-binding protein.
  
  0.769
SKA80800.1
ABC-2 type transport system ATP-binding protein.
  
  0.683
SKA82865.1
ABC-2 type transport system ATP-binding protein.
 
  0.655
SKA81348.1
ABC-2 type transport system ATP-binding protein.
 
  0.643
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.