STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA92378.1Putative ABC transport system ATP-binding protein. (260 aa)    
Predicted Functional Partners:
SKA97473.1
Putative ABC transport system permease protein.
  
 0.991
SKA98752.1
Putative ABC transport system permease protein.
  
 0.991
SKA99714.1
Putative ABC transport system permease protein.
  
 0.991
SKA86203.1
Putative ABC transport system permease protein.
  0.986
SKA92391.1
ABC-type antimicrobial peptide transport system, permease component.
  0.948
SKA96896.1
ABC-type multidrug transport system, ATPase component.
 
    
0.911
SKA76419.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.900
SKA76424.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.887
SKA80656.1
ABC transporter.
 
     
0.863
SKA87772.1
Cystine transport system permease protein.
 
 
 
  0.844
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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