STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA94282.1Toprim-like. (301 aa)    
Predicted Functional Partners:
SKA94268.1
Hypothetical protein.
 
     0.840
SKA94238.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
    0.812
SKA94221.1
Protein of unknown function.
  
     0.768
SKA94572.1
Protein of unknown function.
  
     0.764
SKA94588.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
    0.763
SKA75424.1
DNA polymerase I.
  
 
 0.761
SKA94118.1
Hypothetical protein.
  
     0.757
SKA94541.1
Hypothetical protein.
  
     0.757
SKA94251.1
Hypothetical protein.
 
 
  0.756
SKA96248.1
Hypothetical protein.
  
     0.752
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.