Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA73480.1 | SKA94795.1 | SAMN02745178_00160 | SAMN02745178_02538 | Glycosyltransferase, GT2 family. | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 0.416 |
SKA75988.1 | SKA94795.1 | SAMN02745178_00511 | SAMN02745178_02538 | LPXTG-motif cell wall anchor domain-containing protein/fibro-slime domain-containing protein. | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 0.483 |
SKA83321.1 | SKA94795.1 | SAMN02745178_01306 | SAMN02745178_02538 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family. | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 0.441 |
SKA94784.1 | SKA94790.1 | SAMN02745178_02536 | SAMN02745178_02537 | Glycosidase. | Hypothetical protein. | 0.760 |
SKA94784.1 | SKA94795.1 | SAMN02745178_02536 | SAMN02745178_02538 | Glycosidase. | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 0.609 |
SKA94784.1 | SKA94800.1 | SAMN02745178_02536 | SAMN02745178_02539 | Glycosidase. | Hypothetical protein. | 0.430 |
SKA94790.1 | SKA94784.1 | SAMN02745178_02537 | SAMN02745178_02536 | Hypothetical protein. | Glycosidase. | 0.760 |
SKA94790.1 | SKA94795.1 | SAMN02745178_02537 | SAMN02745178_02538 | Hypothetical protein. | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 0.639 |
SKA94790.1 | SKA94800.1 | SAMN02745178_02537 | SAMN02745178_02539 | Hypothetical protein. | Hypothetical protein. | 0.453 |
SKA94795.1 | SKA73480.1 | SAMN02745178_02538 | SAMN02745178_00160 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Glycosyltransferase, GT2 family. | 0.416 |
SKA94795.1 | SKA75988.1 | SAMN02745178_02538 | SAMN02745178_00511 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | LPXTG-motif cell wall anchor domain-containing protein/fibro-slime domain-containing protein. | 0.483 |
SKA94795.1 | SKA83321.1 | SAMN02745178_02538 | SAMN02745178_01306 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family. | 0.441 |
SKA94795.1 | SKA94784.1 | SAMN02745178_02538 | SAMN02745178_02536 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Glycosidase. | 0.609 |
SKA94795.1 | SKA94790.1 | SAMN02745178_02538 | SAMN02745178_02537 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Hypothetical protein. | 0.639 |
SKA94795.1 | SKA94800.1 | SAMN02745178_02538 | SAMN02745178_02539 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Hypothetical protein. | 0.537 |
SKA94795.1 | SKA96405.1 | SAMN02745178_02538 | SAMN02745178_02713 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Lysophospholipase L1. | 0.404 |
SKA94795.1 | SKA97192.1 | SAMN02745178_02538 | SAMN02745178_02779 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.448 |
SKA94800.1 | SKA94784.1 | SAMN02745178_02539 | SAMN02745178_02536 | Hypothetical protein. | Glycosidase. | 0.430 |
SKA94800.1 | SKA94790.1 | SAMN02745178_02539 | SAMN02745178_02537 | Hypothetical protein. | Hypothetical protein. | 0.453 |
SKA94800.1 | SKA94795.1 | SAMN02745178_02539 | SAMN02745178_02538 | Hypothetical protein. | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 0.537 |
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