Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA74109.1 | SKA78178.1 | SAMN02745178_00263 | SAMN02745178_00751 | Threonine dehydratase. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.919 |
SKA74109.1 | SKA87354.1 | SAMN02745178_00263 | SAMN02745178_01728 | Threonine dehydratase. | Aminotransferase. | 0.818 |
SKA74109.1 | SKA94877.1 | SAMN02745178_00263 | SAMN02745178_02558 | Threonine dehydratase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.892 |
SKA74330.1 | SKA86099.1 | SAMN02745178_00312 | SAMN02745178_01599 | L-asparaginase. | Asparagine synthase (glutamine-hydrolysing). | 0.739 |
SKA74330.1 | SKA87354.1 | SAMN02745178_00312 | SAMN02745178_01728 | L-asparaginase. | Aminotransferase. | 0.724 |
SKA74330.1 | SKA93752.1 | SAMN02745178_00312 | SAMN02745178_02427 | L-asparaginase. | L-aspartate oxidase. | 0.839 |
SKA74330.1 | SKA94877.1 | SAMN02745178_00312 | SAMN02745178_02558 | L-asparaginase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.815 |
SKA74330.1 | argG | SAMN02745178_00312 | SAMN02745178_01993 | L-asparaginase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.828 |
SKA77323.1 | SKA78864.1 | SAMN02745178_00633 | SAMN02745178_00843 | Diaminopimelate decarboxylase. | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.603 |
SKA77323.1 | SKA94877.1 | SAMN02745178_00633 | SAMN02745178_02558 | Diaminopimelate decarboxylase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.939 |
SKA77323.1 | argG | SAMN02745178_00633 | SAMN02745178_01993 | Diaminopimelate decarboxylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.484 |
SKA77323.1 | purA | SAMN02745178_00633 | SAMN02745178_01182 | Diaminopimelate decarboxylase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.408 |
SKA78178.1 | SKA74109.1 | SAMN02745178_00751 | SAMN02745178_00263 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Threonine dehydratase. | 0.919 |
SKA78178.1 | SKA78864.1 | SAMN02745178_00751 | SAMN02745178_00843 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.562 |
SKA78178.1 | SKA87354.1 | SAMN02745178_00751 | SAMN02745178_01728 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Aminotransferase. | 0.799 |
SKA78178.1 | SKA94877.1 | SAMN02745178_00751 | SAMN02745178_02558 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.913 |
SKA78864.1 | SKA77323.1 | SAMN02745178_00843 | SAMN02745178_00633 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Diaminopimelate decarboxylase. | 0.603 |
SKA78864.1 | SKA78178.1 | SAMN02745178_00843 | SAMN02745178_00751 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.562 |
SKA78864.1 | SKA94877.1 | SAMN02745178_00843 | SAMN02745178_02558 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.967 |
SKA78864.1 | argG | SAMN02745178_00843 | SAMN02745178_01993 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.578 |
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