STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA95233.1Hypothetical protein. (428 aa)    
Predicted Functional Partners:
SKA77709.1
Mannose-1-phosphate guanylyltransferase.
  
 
 0.675
SKA95238.1
PAP2 superfamily protein.
  
 
 0.602
SKA82980.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
  
 0.594
SKA75295.1
1,4-alpha-glucan branching enzyme.
   
  0.580
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.580
SKA93600.1
UDP-galactopyranose mutase.
  
 
  0.551
SKA87347.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.525
SKA73002.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.516
SKA87342.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.503
SKA84672.1
Hypothetical protein.
    
   0.483
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.