Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA86849.1 | SKA92719.1 | SAMN02745178_01640 | SAMN02745178_02270 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.960 |
SKA86849.1 | SKA93619.1 | SAMN02745178_01640 | SAMN02745178_02397 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.895 |
SKA86849.1 | SKA95750.1 | SAMN02745178_01640 | SAMN02745178_02653 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.713 |
SKA87694.1 | SKA93386.1 | SAMN02745178_01754 | SAMN02745178_02374 | Raffinose/stachyose/melibiose transport system substrate-binding protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.494 |
SKA87694.1 | SKA95739.1 | SAMN02745178_01754 | SAMN02745178_02651 | Raffinose/stachyose/melibiose transport system substrate-binding protein. | Putative ABC transport system permease protein. | 0.764 |
SKA87694.1 | SKA95750.1 | SAMN02745178_01754 | SAMN02745178_02653 | Raffinose/stachyose/melibiose transport system substrate-binding protein. | Signal transduction histidine kinase. | 0.755 |
SKA87694.1 | SKA95757.1 | SAMN02745178_01754 | SAMN02745178_02654 | Raffinose/stachyose/melibiose transport system substrate-binding protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.507 |
SKA89557.1 | SKA92719.1 | SAMN02745178_01943 | SAMN02745178_02270 | Ammonium transporter, Amt family; Belongs to the P(II) protein family. | Hypothetical protein. | 0.914 |
SKA89557.1 | SKA95750.1 | SAMN02745178_01943 | SAMN02745178_02653 | Ammonium transporter, Amt family; Belongs to the P(II) protein family. | Signal transduction histidine kinase. | 0.701 |
SKA92719.1 | SKA86849.1 | SAMN02745178_02270 | SAMN02745178_01640 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.960 |
SKA92719.1 | SKA89557.1 | SAMN02745178_02270 | SAMN02745178_01943 | Hypothetical protein. | Ammonium transporter, Amt family; Belongs to the P(II) protein family. | 0.914 |
SKA92719.1 | SKA93284.1 | SAMN02745178_02270 | SAMN02745178_02349 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.960 |
SKA92719.1 | SKA93619.1 | SAMN02745178_02270 | SAMN02745178_02397 | Hypothetical protein. | Signal transduction histidine kinase. | 0.977 |
SKA92719.1 | SKA95750.1 | SAMN02745178_02270 | SAMN02745178_02653 | Hypothetical protein. | Signal transduction histidine kinase. | 0.905 |
SKA92719.1 | SKA95757.1 | SAMN02745178_02270 | SAMN02745178_02654 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.960 |
SKA93284.1 | SKA92719.1 | SAMN02745178_02349 | SAMN02745178_02270 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.960 |
SKA93284.1 | SKA93619.1 | SAMN02745178_02349 | SAMN02745178_02397 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.871 |
SKA93284.1 | SKA95750.1 | SAMN02745178_02349 | SAMN02745178_02653 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.757 |
SKA93386.1 | SKA87694.1 | SAMN02745178_02374 | SAMN02745178_01754 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Raffinose/stachyose/melibiose transport system substrate-binding protein. | 0.494 |
SKA93386.1 | SKA95739.1 | SAMN02745178_02374 | SAMN02745178_02651 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Putative ABC transport system permease protein. | 0.741 |
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