STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA95750.1Signal transduction histidine kinase. (414 aa)    
Predicted Functional Partners:
SKA95757.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.970
SKA92719.1
Hypothetical protein.
  
 0.905
SKA95739.1
Putative ABC transport system permease protein.
 
    0.889
SKA93619.1
Signal transduction histidine kinase.
 
 
0.787
SKA93284.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.757
SKA87694.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
  
     0.755
SKA95745.1
Putative ABC transport system ATP-binding protein.
 
     0.750
SKA86849.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.713
SKA89557.1
Ammonium transporter, Amt family; Belongs to the P(II) protein family.
 
 
 0.701
SKA93386.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.691
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
Server load: low (16%) [HD]