STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA96661.1GHKL domain-containing protein. (427 aa)    
Predicted Functional Partners:
SKA96657.1
Two component transcriptional regulator, LytTR family.
 
  
  0.942
SKA96653.1
Beta-glucosidase.
 
    0.854
SKA96910.1
GHKL domain-containing protein.
  
  
  0.795
SKA80115.1
Two component transcriptional regulator, LytTR family.
  
  
  0.793
SKA80351.1
Two component transcriptional regulator, LytTR family.
  
  
  0.791
SKA88775.1
Two component transcriptional regulator, LytTR family.
  
  
  0.791
SKA94994.1
Two component transcriptional regulator, LytTR family.
  
  
  0.790
SKA88094.1
Two component transcriptional regulator, LytTR family.
  
  
  0.780
SKA92144.1
Two component transcriptional regulator, LytTR family.
  
  
  0.730
SKA79310.1
Two component transcriptional regulator, LytTR family.
  
  
  0.720
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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