STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA96827.1PTS system IIB component, Glc family /PTS system IIC component, Glc family. (471 aa)    
Predicted Functional Partners:
SKA74182.1
PTS system, glucose-specific IIA component.
 0.999
SKA96564.1
PTS system, D-glucosamine-specific IIC component.
 0.999
SKA89870.1
Mannose-6-phosphate isomerase, type 1.
  
 0.996
SKA97174.1
Mannose-6-phosphate isomerase.
  
 0.996
SKA96834.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
 0.991
SKA78985.1
Glucokinase.
  
 0.985
SKA88857.1
Glucokinase.
  
 0.985
SKA97182.1
Glucokinase.
  
 0.985
SKA88173.1
Beta-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family.
 
 0.975
SKA96568.1
Transcriptional antiterminator, BglG family.
 
 0.973
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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