STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA96834.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (299 aa)    
Predicted Functional Partners:
SKA96564.1
PTS system, D-glucosamine-specific IIC component.
  
 0.994
SKA96827.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
  
 0.991
SKA92742.1
PTS system N-acetylglucosamine-specific IIB component, Glc family /PTS system N-acetylglucosamine-specific IIC component, Glc family.
  
 0.985
SKA73653.1
PTS system, fructose-specific IIC component.
    
 0.886
SKA79072.1
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
    
 0.886
SKA91510.1
PTS system, fructose-specific IIC component.
    
 0.886
SKA96837.1
Predicted glycoside hydrolase or deacetylase ChbG, UPF0249 family.
 
     0.866
SKA96831.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
  0.797
SKA77709.1
Mannose-1-phosphate guanylyltransferase.
    
 0.763
nanE
N-acylglucosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
 0.685
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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