Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA74449.1 | SKA90810.1 | SAMN02745178_00334 | SAMN02745178_02062 | DNA binding domain-containing protein, excisionase family. | RNA polymerase sigma factor, sigma-70 family. | 0.705 |
SKA74449.1 | SKA90817.1 | SAMN02745178_00334 | SAMN02745178_02063 | DNA binding domain-containing protein, excisionase family. | Helix-turn-helix domain-containing protein. | 0.608 |
SKA74449.1 | SKA97458.1 | SAMN02745178_00334 | SAMN02745178_02799 | DNA binding domain-containing protein, excisionase family. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.665 |
SKA86391.1 | SKA95340.1 | SAMN02745178_01633 | SAMN02745178_02608 | Hypothetical protein. | Antirestriction protein (ArdA). | 0.558 |
SKA86391.1 | SKA97453.1 | SAMN02745178_01633 | SAMN02745178_02798 | Hypothetical protein. | Hypothetical protein. | 0.408 |
SKA86391.1 | SKA97458.1 | SAMN02745178_01633 | SAMN02745178_02799 | Hypothetical protein. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.531 |
SKA86847.1 | SKA97458.1 | SAMN02745178_01639 | SAMN02745178_02799 | Hypothetical protein. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.800 |
SKA90737.1 | SKA95341.1 | SAMN02745178_02050 | SAMN02745178_02609 | Protein of unknown function. | Hypothetical protein. | 0.975 |
SKA90737.1 | SKA97458.1 | SAMN02745178_02050 | SAMN02745178_02799 | Protein of unknown function. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.539 |
SKA90810.1 | SKA74449.1 | SAMN02745178_02062 | SAMN02745178_00334 | RNA polymerase sigma factor, sigma-70 family. | DNA binding domain-containing protein, excisionase family. | 0.705 |
SKA90810.1 | SKA90817.1 | SAMN02745178_02062 | SAMN02745178_02063 | RNA polymerase sigma factor, sigma-70 family. | Helix-turn-helix domain-containing protein. | 0.948 |
SKA90810.1 | SKA97458.1 | SAMN02745178_02062 | SAMN02745178_02799 | RNA polymerase sigma factor, sigma-70 family. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.755 |
SKA90817.1 | SKA74449.1 | SAMN02745178_02063 | SAMN02745178_00334 | Helix-turn-helix domain-containing protein. | DNA binding domain-containing protein, excisionase family. | 0.608 |
SKA90817.1 | SKA90810.1 | SAMN02745178_02063 | SAMN02745178_02062 | Helix-turn-helix domain-containing protein. | RNA polymerase sigma factor, sigma-70 family. | 0.948 |
SKA90817.1 | SKA97458.1 | SAMN02745178_02063 | SAMN02745178_02799 | Helix-turn-helix domain-containing protein. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.755 |
SKA95339.1 | SKA95340.1 | SAMN02745178_02607 | SAMN02745178_02608 | DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Antirestriction protein (ArdA). | 0.931 |
SKA95339.1 | SKA95341.1 | SAMN02745178_02607 | SAMN02745178_02609 | DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Hypothetical protein. | 0.873 |
SKA95339.1 | SKA97453.1 | SAMN02745178_02607 | SAMN02745178_02798 | DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Hypothetical protein. | 0.574 |
SKA95339.1 | SKA97458.1 | SAMN02745178_02607 | SAMN02745178_02799 | DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.531 |
SKA95340.1 | SKA86391.1 | SAMN02745178_02608 | SAMN02745178_01633 | Antirestriction protein (ArdA). | Hypothetical protein. | 0.558 |
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