STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA98752.1Putative ABC transport system permease protein. (506 aa)    
Predicted Functional Partners:
SKA98756.1
Putative ABC transport system ATP-binding protein.
 
 0.999
SKA97468.1
Putative ABC transport system ATP-binding protein.
 
 0.997
SKA90796.1
Putative ABC transport system ATP-binding protein.
 
 0.995
SKA95745.1
Putative ABC transport system ATP-binding protein.
 
 0.995
SKA93414.1
Putative ABC transport system ATP-binding protein.
 
 0.993
SKA99714.1
Putative ABC transport system permease protein.
 
 0.992
SKA86196.1
Putative ABC transport system ATP-binding protein.
  
 0.991
SKA92378.1
Putative ABC transport system ATP-binding protein.
  
 0.991
SKA79100.1
Hypothetical protein.
  
 
 0.918
SKA79141.1
Protein of unknown function.
   
 
 0.818
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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