STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA99140.1Peptidase family M23. (228 aa)    
Predicted Functional Partners:
SKA81593.1
Peptidase family M23.
  
    0.620
SKA74015.1
Peptidase family M23.
  
     0.583
SKA94499.1
Peptidase family M23.
  
    0.579
SKA97002.1
Peptidase family M23.
  
     0.548
SKA99043.1
Peptidase family M23.
  
     0.524
SKA98990.1
Peptidase family M23.
  
     0.482
SKA84091.1
Peptidase family M23.
  
   
 0.425
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.