STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU96_1302Hypothetical protein; Alternative locus ID: PMIT9302_0791; FIG00940386: hypothetical protein. (219 aa)    
Predicted Functional Partners:
EU96_0504
DNA polymerasee III alpha subunit; Alternative locus ID: PMIT9302_1069.
    
 0.935
dnaX
DNA polymerasee III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
 0.930
EU96_0783
DNA polymerasee III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 0.923
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
   
 
 0.899
EU96_0713
DNA polymerasee III delta subunit; Alternative locus ID: PMIT9302_1276.
    
 0.761
EU96_1303
O-acetylhomoserine sulfhydrylase; Alternative locus ID: PMIT9302_0792; O-succinylhomoserine sulfhydrylase.
       0.680
polA
DNA polymerasee I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.661
EU96_1301
Hypothetical protein; Alternative locus ID: PMIT9302_0790; FIG00940810: hypothetical protein.
       0.657
EU96_0651
Ribonuclease D related protein; Alternative locus ID: PMIT9302_1213.
   
 0.585
EU96_1881
Cold-shock DEAD-box protein A; Alternative locus ID: PMIT9302_1793; Belongs to the DEAD box helicase family.
   
 0.561
Your Current Organism:
Prochlorococcus marinus MIT9302
NCBI taxonomy Id: 74545
Other names: P. marinus str. MIT 9302, Prochlorococcus marinus str. MIT 9302, Prochlorococcus sp. MIT 9302, Prochlorococcus sp. MIT9302
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.