STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU96_1672Putative lumenal protein; Alternative locus ID: PMIT9302_0288; contains 8 pentapeptide repeats, sll0577 homolog. (182 aa)    
Predicted Functional Partners:
EU96_1935
Photosystem II manganese-stabilizing protein (PsbO); Alternative locus ID: PMIT9302_1499.
  
     0.760
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
    
 
 0.758
EU96_1186
Hypothetical protein; Alternative locus ID: PMIT9302_0675; FIG00940617: hypothetical protein.
  
     0.749
EU96_0140
YggT family protein; Alternative locus ID: PMIT9302_1415; required for proper distribution of nucleoids in chloroplast and cyanobacteria.
  
     0.736
EU96_1279
Alpha/beta hydrolase; Alternative locus ID: PMIT9302_0768.
  
     0.735
EU96_0505
Hypothetical protein; Alternative locus ID: PMIT9302_1070; FIG00940912: hypothetical protein.
  
     0.723
EU96_1507
Hypothetical protein; Alternative locus ID: PMIT9302_0123; FIG137771: hypothetical protein.
  
     0.723
EU96_0329
Hypothetical protein; Alternative locus ID: PMIT9302_0894; FIG00940302: hypothetical protein.
  
     0.714
EU96_0877
Conserved NnrU/NnuR-like membrane enzyme; Alternative locus ID: PMIT9302_1680.
  
     0.712
EU96_1126
Photosystem I subunit III precursor; Alternative locus ID: PMIT9302_0615; plastocyanin (cyt c553) docking protein (PsaF).
  
     0.708
Your Current Organism:
Prochlorococcus marinus MIT9302
NCBI taxonomy Id: 74545
Other names: P. marinus str. MIT 9302, Prochlorococcus marinus str. MIT 9302, Prochlorococcus sp. MIT 9302, Prochlorococcus sp. MIT9302
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.