node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EU96_1855 | nusA | EU96_1855 | EU96_1854 | Hypothetical protein; Alternative locus ID: PMIT9302_0471; COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | 0.979 |
EU96_1855 | rbfA | EU96_1855 | EU96_0196 | Hypothetical protein; Alternative locus ID: PMIT9302_0471; COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.429 |
EU96_1855 | rimP | EU96_1855 | EU96_1853 | Hypothetical protein; Alternative locus ID: PMIT9302_0471; COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.956 |
EU96_1855 | rpsB | EU96_1855 | EU96_0405 | Hypothetical protein; Alternative locus ID: PMIT9302_0471; COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | SSU ribosomal protein S2p (SAe); Alternative locus ID: PMIT9302_0970; Belongs to the universal ribosomal protein uS2 family. | 0.434 |
EU96_1855 | rpsL | EU96_1855 | EU96_0283 | Hypothetical protein; Alternative locus ID: PMIT9302_0471; COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | SSU ribosomal protein S12p (S23e); Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.613 |
nusA | EU96_1855 | EU96_1854 | EU96_1855 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | Hypothetical protein; Alternative locus ID: PMIT9302_0471; COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | 0.979 |
nusA | rbfA | EU96_1854 | EU96_0196 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.449 |
nusA | rimP | EU96_1854 | EU96_1853 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.990 |
nusA | rpsB | EU96_1854 | EU96_0405 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S2p (SAe); Alternative locus ID: PMIT9302_0970; Belongs to the universal ribosomal protein uS2 family. | 0.991 |
nusA | rpsF | EU96_1854 | EU96_0773 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA. | 0.926 |
nusA | rpsG | EU96_1854 | EU96_0282 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S7p (S5e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.996 |
nusA | rpsJ | EU96_1854 | EU96_0279 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S10p (S20e); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.990 |
nusA | rpsL | EU96_1854 | EU96_0283 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S12p (S23e); Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.990 |
nusA | rpsP | EU96_1854 | EU96_1606 | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S16p; Alternative locus ID: PMIT9302_0222; Belongs to the bacterial ribosomal protein bS16 family. | 0.874 |
rbfA | EU96_1855 | EU96_0196 | EU96_1855 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Hypothetical protein; Alternative locus ID: PMIT9302_0471; COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination. | 0.429 |
rbfA | nusA | EU96_0196 | EU96_1854 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Transcription termination protein NusA; Participates in both transcription termination and antitermination. | 0.449 |
rbfA | rimP | EU96_0196 | EU96_1853 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.889 |
rbfA | rpsB | EU96_0196 | EU96_0405 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | SSU ribosomal protein S2p (SAe); Alternative locus ID: PMIT9302_0970; Belongs to the universal ribosomal protein uS2 family. | 0.869 |
rbfA | rpsF | EU96_0196 | EU96_0773 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA. | 0.857 |
rbfA | rpsG | EU96_0196 | EU96_0282 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | SSU ribosomal protein S7p (S5e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.938 |