close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU96_1981Putative oxidoreductase; Alternative locus ID: PMIT9302_1545. (334 aa)    
Predicted Functional Partners:
EU96_1992
Putative pleiotropic regulatory protein; Alternative locus ID: PMIT9302_1556; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.842
EU96_1524
DegT/DnrJ/EryC1/StrS aminotransferase; Alternative locus ID: PMIT9302_0140; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.814
EU96_0435
Oxidoreductase; Alternative locus ID: PMIT9302_1000; N-terminal:Oxidoreductase, C-terminal, utilizes NADP or NAD.
  
     0.724
EU96_1982
CBS-domain containing hemolysin; Alternative locus ID: PMIT9302_1546.
  
    0.720
lysS
Lysyl-tRNA synthetase (class II); Alternative locus ID: PMIT9302_1249; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.603
EU96_1537
dTDP-glucose 4,6-dehydratase; Alternative locus ID: PMIT9302_0153; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.600
EU96_0986
Aldehyde dehydrogenase; Alternative locus ID: PMIT9302_0475; Belongs to the aldehyde dehydrogenase family.
   
 
 0.533
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
     
 0.504
EU96_1984
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress; Alternative locus ID: PMIT9302_1548.
       0.494
EU96_0695
Fructokinase; Alternative locus ID: PMIT9302_1258.
  
 
 0.491
Your Current Organism:
Prochlorococcus marinus MIT9302
NCBI taxonomy Id: 74545
Other names: P. marinus str. MIT 9302, Prochlorococcus marinus str. MIT 9302, Prochlorococcus sp. MIT 9302, Prochlorococcus sp. MIT9302
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.