STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU96_2015Phycoerythrin beta chain; Alternative locus ID: PMIT9302_1579; Phycobilisome protein. (170 aa)    
Predicted Functional Partners:
EU96_0421
Glucose-1-phosphate adenylyltransferase; Alternative locus ID: PMIT9302_0986; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.990
cpcS
Phycoerythrin linker protein CpeS-like; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
  
 0.986
EU96_1841
HEAT repeat; Alternative locus ID: PMIT9302_0457.
  
  
 0.829
pebA
15,16-dihydrobiliverdin:ferredoxin oxidoreductase PebA; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family.
  
   
 0.782
EU96_1647
Hypothetical protein; Alternative locus ID: PMIT9302_0263.
  
     0.773
EU96_0969
Putative porin; Alternative locus ID: PMIT9302_1933.
  
     0.735
rpmF
LSU ribosomal protein L32p; Alternative locus ID: PMIT9302_1842; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.733
EU96_0555
Hypothetical protein; Alternative locus ID: PMIT9302_1120; FIG00940620: hypothetical protein.
  
     0.725
EU96_1961
Repeats containing protein; Alternative locus ID: PMIT9302_1525.
  
     0.719
EU96_1791
Hypothetical protein; Alternative locus ID: PMIT9302_0407; FIG00940322: hypothetical protein.
  
     0.700
Your Current Organism:
Prochlorococcus marinus MIT9302
NCBI taxonomy Id: 74545
Other names: P. marinus str. MIT 9302, Prochlorococcus marinus str. MIT 9302, Prochlorococcus sp. MIT 9302, Prochlorococcus sp. MIT9302
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.