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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB49310.1Conserved hypothetical protein; Alternative locus ID: P9312_02571. (319 aa)    
Predicted Functional Partners:
ABB49311.1
Conserved hypothetical protein; Alternative locus ID: P9312_02581.
 
     0.960
ABB50542.1
Permease-like protein; Alternative locus ID: P9312_16171.
 
     0.786
ABB50496.1
Outer envelope membrane protein-like protein; Alternative locus ID: P9312_15571.
  
     0.750
ABB49309.1
Transcriptional regulator, Crp/Fnr family; Alternative locus ID: P9312_02561.
       0.735
ABB49122.1
Conserved hypothetical protein; Alternative locus ID: P9312_00631.
 
     0.731
ABB50739.1
Conserved hypothetical protein; Alternative locus ID: P9312_18291.
  
     0.713
ABB49183.1
Conserved hypothetical protein; Alternative locus ID: P9312_01281.
  
     0.687
ABB49832.1
ATPase; Alternative locus ID: P9312_08241.
 
     0.668
ABB50240.1
Outer membrane protein-like protein; Alternative locus ID: P9312_12801.
  
     0.660
ABB50493.1
acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
     0.638
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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