STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB49406.1Phytoene dehydrogenase; Alternative locus ID: P9312_03591. (509 aa)    
Predicted Functional Partners:
ABB49207.1
Phytoene synthase; Alternative locus ID: P9312_01521.
 
  
 0.869
ABB49180.1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
 
  
 0.717
ABB49351.1
Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.652
ABS83100.1
Conserved hypothetical protein; Alternative locus ID: P9312_03601.
       0.636
ABB49232.1
Mg-protoporphyrin IX methyltransferase; Alternative locus ID: P9312_01781.
  
  
 0.570
ABS83099.1
Conserved hypothetical protein; Alternative locus ID: P9312_03581.
       0.527
ABB50782.1
Alpha/beta hydrolase superfamily-like protein; Alternative locus ID: P9312_18721.
  
    0.514
ABB49488.1
Chlorophyll synthase; Alternative locus ID: P9312_04521.
 
  
 0.500
ABB49828.1
Geranylgeranyl reductase; Alternative locus ID: P9312_08201.
 
  
 0.480
ABB49665.1
Conserved hypothetical protein; Alternative locus ID: P9312_06301.
  
     0.457
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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