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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB49537.1Conserved hypothetical protein; Alternative locus ID: P9312_05011. (102 aa)    
Predicted Functional Partners:
rplS
LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
       0.679
ABB50665.1
Conserved hypothetical protein; Alternative locus ID: P9312_17551.
  
     0.589
ABB50450.1
Putative nickel-containing superoxide dismutase precursor (NISOD); Alternative locus ID: P9312_15111.
  
     0.579
ABB50116.1
Multidrug efflux transporter, MFS family-like protein; Alternative locus ID: P9312_11421.
  
     0.572
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.571
ABB50332.1
Conserved hypothetical protein; Alternative locus ID: P9312_13911.
  
     0.562
ABB50463.1
Conserved hypothetical protein; Alternative locus ID: P9312_15241.
  
     0.560
ABB49450.1
Conserved hypothetical protein; Alternative locus ID: P9312_04141.
  
     0.536
ABB50515.1
Steroid 5-alpha reductase-like protein; Alternative locus ID: P9312_15761.
  
     0.531
ABB50015.1
Conserved hypothetical protein; Alternative locus ID: P9312_10191.
  
     0.519
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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