STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgBGlycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (754 aa)    
Predicted Functional Partners:
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.999
ABB50754.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.995
ABB50480.1
Isoamylase; Alternative locus ID: P9312_15411; Belongs to the glycosyl hydrolase 13 family.
 
 
0.990
ABB49837.1
Glucose-1-phosphate adenylyltransferase; Alternative locus ID: P9312_08291; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
  
 0.969
ABB50151.1
4-alpha-glucanotransferase; Alternative locus ID: P9312_11781.
  
 
 0.959
ABB50135.1
(1->4)-alpha-D-glucan branching enzyme; Alternative locus ID: P9312_11611; Belongs to the glycosyl hydrolase 57 family.
     
 0.910
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 0.909
ABB49140.1
Phosphoglucomutase; Alternative locus ID: P9312_00811.
  
  
 0.873
ABB49394.1
Putative neutral invertase-like protein; Alternative locus ID: P9312_03421.
  
  
 0.736
ABB49646.1
Conserved hypothetical protein; Alternative locus ID: P9312_06101.
       0.713
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.