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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB49646.1Conserved hypothetical protein; Alternative locus ID: P9312_06101. (526 aa)    
Predicted Functional Partners:
ABB49647.1
Conserved hypothetical protein; Alternative locus ID: P9312_06111.
       0.832
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
       0.713
ABB49648.1
Conserved hypothetical protein; Alternative locus ID: P9312_06121.
       0.693
ABB49649.1
Conserved hypothetical protein; Alternative locus ID: P9312_06131.
       0.685
ABB50027.1
Conserved hypothetical protein; Alternative locus ID: P9312_10321.
  
   
 0.616
ABB49592.1
Creatininase; Alternative locus ID: P9312_05561.
 
     0.603
ABB49158.1
High light inducible protein-like protein; Alternative locus ID: P9312_01011.
  
     0.580
ABB50748.1
Conserved hypothetical protein; Alternative locus ID: P9312_18381.
  
     0.571
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
       0.561
ABB49643.1
Conserved hypothetical protein; Alternative locus ID: P9312_06071.
       0.559
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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