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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB49693.1Short-chain dehydrogenase/reductase (SDR) superfamily; Alternative locus ID: P9312_06591. (235 aa)    
Predicted Functional Partners:
ABB49694.1
Lycopene cyclase (CrtL-type); Alternative locus ID: P9312_06601.
  
  
 0.834
ABB50410.1
2-deoxy-D-gluconate 3-dehydrogenase; Alternative locus ID: P9312_14701.
  
 
   0.756
ABB49596.1
Putative short-chain dehydrogenase; Alternative locus ID: P9312_05601; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.753
ABB49695.1
NADPH-protochlorophyllide oxidoreductase; Alternative locus ID: P9312_06611.
 
     0.719
ABB50412.1
Putative oxidoreductase; Alternative locus ID: P9312_14721.
  
 
   0.700
ABB50411.1
Dehydrogenases with different specificities; related to short-chain alcohol dehydrogenases; Alternative locus ID: P9312_14711.
  
 
   0.689
ABB50519.1
Short-chain dehydrogenase/reductase (SDR) superfamily; Alternative locus ID: P9312_15811.
  
 
   0.614
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
  
 0.414
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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