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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB49784.1Multidrug efflux transporter, MFS family; Alternative locus ID: P9312_07701. (419 aa)    
Predicted Functional Partners:
ABB49785.1
Glyceraldehyde-3-phosphate dehydrogenase; Alternative locus ID: P9312_07711; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
   
 0.933
ABB49783.1
Chromate transporter; Alternative locus ID: P9312_07691.
     
 0.749
ABB49786.1
Transcriptional regulator, ArsR family; Alternative locus ID: P9312_07721.
     
 0.565
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.490
ABB50664.1
Glutamate synthase (ferredoxin); Alternative locus ID: P9312_17541.
      
 0.463
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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