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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB49915.1Conserved hypothetical protein; Alternative locus ID: P9312_09121. (148 aa)    
Predicted Functional Partners:
rpsO
SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
       0.831
ABB50345.1
Conserved hypothetical protein; Alternative locus ID: P9312_14041.
  
     0.773
ABB49590.1
Conserved hypothetical protein; Alternative locus ID: P9312_05541.
  
     0.772
ABB49681.1
Conserved hypothetical protein; Alternative locus ID: P9312_06461.
  
     0.772
ABB49292.1
Photosystem II manganese-stabilizing protein; Alternative locus ID: P9312_02391.
  
     0.771
psb27
Photosystem II reaction center Psb27 protein-like protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.771
ABB49741.1
Conserved hypothetical protein; Alternative locus ID: P9312_07111.
  
     0.771
ABB49124.1
YGGT family, conserved hypothetical integral membrane protein; Alternative locus ID: P9312_00651.
  
     0.766
ABB49166.1
Thioredoxin domain 2; Alternative locus ID: P9312_01091.
  
     0.760
ABB49359.1
Conserved hypothetical protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
   
 0.757
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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