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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB49946.1Biotin synthase; Alternative locus ID: P9312_09441. (189 aa)    
Predicted Functional Partners:
ABB49449.1
Cobalt transport protein-like protein; Alternative locus ID: P9312_04131.
  
 0.986
ABB49190.1
ATPase; Alternative locus ID: P9312_01351.
   
 0.954
ABB49727.1
ATPase; Alternative locus ID: P9312_06971.
   
 0.954
ABB49944.1
Small GTP-binding protein domain; Alternative locus ID: P9312_09421.
 
     0.864
lspA
Signal peptidase II, Aspartic peptidase, MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.832
ABB49947.1
ABC transporter-like protein; Alternative locus ID: P9312_09451.
       0.808
ABB49948.1
Pyruvate kinase; Alternative locus ID: P9312_09461; Belongs to the pyruvate kinase family.
       0.746
ABB49949.1
Conserved hypothetical protein; Alternative locus ID: P9312_09471.
       0.607
ABB50355.1
Conserved hypothetical protein; Alternative locus ID: P9312_14151.
  
     0.586
ABB50142.1
Cobyrinate a,c-diamide synthase; Alternative locus ID: P9312_11681.
  
    0.571
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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