STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB50118.1Putative ABC transporter, oligopeptides; Alternative locus ID: P9312_11441. (340 aa)    
Predicted Functional Partners:
ABB49478.1
Putative ABC transporter, oligopeptides; Alternative locus ID: P9312_04421.
 
 0.998
ABB50119.1
ABC transporter, substrate binding protein, possibly oligopeptides; Alternative locus ID: P9312_11451.
 
 0.998
ABB49256.1
ATPase; Alternative locus ID: P9312_02021.
 
 0.993
ABB50120.1
Conserved hypothetical protein; Alternative locus ID: P9312_11461.
       0.801
ABB50121.1
Homoserine dehydrogenase; Alternative locus ID: P9312_11471.
       0.652
ABB50122.1
Conserved hypothetical protein; Alternative locus ID: P9312_11481.
       0.560
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.523
ruvC
Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
     
 0.474
ABB50123.1
Conserved hypothetical protein; Alternative locus ID: P9312_11491; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.460
ABB50125.1
Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
       0.453
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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