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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB50170.1Conserved hypothetical protein; Alternative locus ID: P9312_11971. (96 aa)    
Predicted Functional Partners:
deaD
ATP-dependent RNA helicase CsdA; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.
       0.823
ABB50169.1
ATPase; Alternative locus ID: P9312_11961.
       0.821
ABB50172.1
DNA helicase/exodeoxyribonuclease V, alpha subunit; Alternative locus ID: P9312_11991.
       0.486
ABB50173.1
DNA helicase/exodeoxyribonuclease V, beta subunit; Alternative locus ID: P9312_12001.
       0.486
ABB50175.1
DNA helicase/exodeoxyribonuclease V, gamma subunit; Alternative locus ID: P9312_12021.
       0.482
ABB50174.1
Conserved hypothetical protein; Alternative locus ID: P9312_12011.
       0.477
ABB50176.1
Conserved hypothetical protein; Alternative locus ID: P9312_12031.
       0.457
pdxJ
Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
       0.455
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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