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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB50209.1Uncharacterized conserved protein containing SWIM-like Zn-finger; Alternative locus ID: P9312_12411. (546 aa)    
Predicted Functional Partners:
ABB50210.1
RNA-directed DNA polymerase; Alternative locus ID: P9312_12421.
 
     0.952
ABB50214.1
ATP-dependent DNA ligase; Alternative locus ID: P9312_12461.
 
     0.782
ABB50208.1
Protein with signal peptide; Alternative locus ID: P9312_12401.
       0.777
ABB50211.1
Hypothetical protein; Alternative locus ID: P9312_12431.
       0.757
ABB50004.1
Thioredoxin peroxidase; Alternative locus ID: P9312_10081.
  
    0.594
ABB50515.1
Steroid 5-alpha reductase-like protein; Alternative locus ID: P9312_15761.
  
     0.549
ABB49698.1
Putative ferric uptake regulator, FUR family; Alternative locus ID: P9312_06651; Belongs to the Fur family.
  
    0.541
ABB50100.1
Putative ferric uptake regulator, FUR family; Alternative locus ID: P9312_11231; Belongs to the Fur family.
  
    0.541
ndhI
NADH-plastoquinone oxidoreductase, I subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient; Belongs to the complex I 23 kDa subunit family.
    
   0.470
psaB
Photosystem I core protein PsaB; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6.
    
   0.470
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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