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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB50251.1Hypothetical protein; Alternative locus ID: P9312_12911. (232 aa)    
Predicted Functional Partners:
ABB50250.1
Hypothetical protein; Alternative locus ID: P9312_12901.
       0.820
ABB50252.1
Hypothetical protein; Alternative locus ID: P9312_12921.
       0.820
ABB50249.1
Hypothetical protein; Alternative locus ID: P9312_12891.
       0.773
ABB50253.1
Type II secretory pathway component PulD-like protein; Alternative locus ID: P9312_12931; Belongs to the bacterial secretin family.
       0.533
ABB50246.1
Type II secretory pathway component PulF-like protein; Alternative locus ID: P9312_12861.
       0.520
ABB50247.1
Twitching motility protein; Alternative locus ID: P9312_12871.
       0.520
ABB50248.1
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB-like protein; Alternative locus ID: P9312_12881.
       0.520
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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