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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB50439.1Conserved hypothetical protein; Alternative locus ID: P9312_15001; Belongs to the BI1 family. (245 aa)    
Predicted Functional Partners:
ABB50027.1
Conserved hypothetical protein; Alternative locus ID: P9312_10321.
  
     0.764
ABB50015.1
Conserved hypothetical protein; Alternative locus ID: P9312_10191.
  
     0.761
ABB49203.1
Conserved hypothetical protein; Alternative locus ID: P9312_01481.
  
     0.742
ABB50355.1
Conserved hypothetical protein; Alternative locus ID: P9312_14151.
  
     0.734
ABB50748.1
Conserved hypothetical protein; Alternative locus ID: P9312_18381.
  
     0.732
ABB49210.1
Conserved hypothetical protein; Alternative locus ID: P9312_01551.
  
     0.727
ABB50716.1
Conserved hypothetical protein; Alternative locus ID: P9312_18061.
  
     0.727
ABB50484.1
Conserved hypothetical protein; Alternative locus ID: P9312_15451.
  
     0.708
ABB49126.1
Conserved hypothetical protein; Alternative locus ID: P9312_00671.
  
     0.705
secE
Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.698
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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