STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB50555.1Putative dape protein; Alternative locus ID: P9312_16401. (291 aa)    
Predicted Functional Partners:
ABB50554.1
Nucleotide binding protein, PINc; Alternative locus ID: P9312_16391.
  
  
 0.771
ABB49541.1
Conserved hypothetical protein; Alternative locus ID: P9312_05051.
  
 
 0.671
ABB50553.1
Hemagglutinin-neuraminidase-like protein; Alternative locus ID: P9312_16381.
       0.630
ndhC
NADH dehydrogenase subunit A; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
    
  0.575
ABB49099.1
TPR repeat; Alternative locus ID: P9312_00371.
     
 0.564
ndhH
NADH dehydrogenase subunit D; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
    
  0.551
ABB50317.1
Maf protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
     
 0.546
ABB49320.1
Competence/damage-inducible protein cinA; Alternative locus ID: P9312_02671; Belongs to the CinA family.
     
 0.541
ABS83231.1
Conserved hypothetical protein; Alternative locus ID: P9312_16371.
       0.539
ABB49575.1
Signal peptidase I, Serine peptidase, MEROPS family S26A; Alternative locus ID: P9312_05391; Belongs to the peptidase S26 family.
  
  
 0.535
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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