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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB50612.1Putative c-type cytochrome biogenesis protein CcdA; Alternative locus ID: P9312_17011. (218 aa)    
Predicted Functional Partners:
ccsB
Putative C-type cytochrome biogenesis protein Ccs1; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
 
  
 0.936
ccsA
Heme transporter-like protein; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
 
  
 0.749
ABB50611.1
Cell division protein FtsW; Alternative locus ID: P9312_17001; Belongs to the SEDS family.
       0.667
ABB50306.1
Thioredoxin reductase; Alternative locus ID: P9312_13641.
  
  
 0.633
ABB50610.1
ATP synthase subunit 1-like protein; Alternative locus ID: P9312_16991.
       0.496
atpB
ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
       0.477
ABB50131.1
Thioredoxin; Alternative locus ID: P9312_11571; Belongs to the thioredoxin family.
  
  
 0.459
ABB50667.1
Site-specific recombinase; Alternative locus ID: P9312_17571.
   
    0.438
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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