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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB50724.1Conserved hypothetical protein; Alternative locus ID: P9312_18141. (274 aa)    
Predicted Functional Partners:
ABB50432.1
Putative circadian phase modifier CpmA; Alternative locus ID: P9312_14931.
 
  
 0.922
ABB49549.1
Protein of unknown function DUF111; Alternative locus ID: P9312_05131.
  
 0.912
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
 
    0.718
ABB50723.1
cob(I)yrinic acid a,c-diamide adenosyltransferase; Alternative locus ID: P9312_18131.
       0.661
ABB49501.1
Aldo/keto reductase family; Alternative locus ID: P9312_04651.
 
    0.529
ABB50629.1
Aldo/keto reductase family; Alternative locus ID: P9312_17181.
 
    0.513
Your Current Organism:
Prochlorococcus marinus MIT9312
NCBI taxonomy Id: 74546
Other names: P. marinus str. MIT 9312, Prochlorococcus marinus str. MIT 9312, Prochlorococcus sp. MIT 9312, Prochlorococcus sp. MIT9312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.