A0A0C3RZ95 protein (Phlebiopsis gigantea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A0C3RZ95

Uncharacterized protein. (768 aa)

Predicted Functional Partners:

A0A0C3S7R3

0.988

A0A0C3S3E2

0.958

A0A0C3SFA7

0.953

A0A0C3P1X9

0.937

A0A0C3PPB3

0.937

A0A0C3PLR5

0.863

A0A0C3PJN8

0.846

A0A0C3NWZ8

0.837

A0A0C3SAD8

0.833

A0A0C3S5S2

0.830

Your Current Organism:

Phlebiopsis gigantea

NCBI taxonomy Id: 745531
Other names: P. gigantea 11061_1 CR5-6, Phlebiopsis gigantea 11061_1 CR5-6

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3NWZ8	A0A0C3P1X9	DNA helicase; Belongs to the MCM family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.990
A0A0C3NWZ8	A0A0C3PJN8	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
A0A0C3NWZ8	A0A0C3PLR5	DNA helicase; Belongs to the MCM family.	DNA polymerase.	0.997
A0A0C3NWZ8	A0A0C3RZ95	DNA helicase; Belongs to the MCM family.	Uncharacterized protein.	0.837
A0A0C3NWZ8	A0A0C3S3E2	DNA helicase; Belongs to the MCM family.	Uncharacterized protein.	0.865
A0A0C3NWZ8	A0A0C3S7R3	DNA helicase; Belongs to the MCM family.	WD_REPEATS_REGION domain-containing protein.	0.643
A0A0C3NWZ8	A0A0C3SAD8	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
A0A0C3P1X9	A0A0C3NWZ8	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA helicase; Belongs to the MCM family.	0.990
A0A0C3P1X9	A0A0C3PJN8	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA helicase; Belongs to the MCM family.	0.951
A0A0C3P1X9	A0A0C3PLR5	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA polymerase.	0.995
A0A0C3P1X9	A0A0C3RZ95	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.937
A0A0C3P1X9	A0A0C3S3E2	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.932
A0A0C3P1X9	A0A0C3S7R3	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	WD_REPEATS_REGION domain-containing protein.	0.974
A0A0C3P1X9	A0A0C3SAD8	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA helicase; Belongs to the MCM family.	0.950
A0A0C3P1X9	A0A0C3SFA7	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	WD_REPEATS_REGION domain-containing protein.	0.840
A0A0C3PJN8	A0A0C3NWZ8	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
A0A0C3PJN8	A0A0C3P1X9	DNA helicase; Belongs to the MCM family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.951
A0A0C3PJN8	A0A0C3PLR5	DNA helicase; Belongs to the MCM family.	DNA polymerase.	0.998
A0A0C3PJN8	A0A0C3RZ95	DNA helicase; Belongs to the MCM family.	Uncharacterized protein.	0.846
A0A0C3PJN8	A0A0C3S3E2	DNA helicase; Belongs to the MCM family.	Uncharacterized protein.	0.950