STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_11538Uncharacterized protein. (641 aa)    
Predicted Functional Partners:
THRCLA_10500
Tetratricopeptide repeat protein.
    
 
 0.565
THRCLA_11583
Lon protease homolog; Belongs to the peptidase S16 family.
     
 0.562
THRCLA_07928
Lon protease homolog; Belongs to the peptidase S16 family.
     
 0.562
THRCLA_00006
Uncharacterized protein.
    
 
 0.516
THRCLA_02814
U5 small nuclear ribonucleoprotein component.
    
 
 0.482
THRCLA_07118
Uncharacterized protein.
    
   0.477
THRCLA_02388
Uncharacterized protein.
    
   0.469
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.