Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THRCLA_00715 | THRCLA_02642 | A0A1W0AB99 | A0A1W0A4G5 | Transmembrane protein. | Ribosome biogenesis protein RLP24. | 0.965 |
THRCLA_00715 | THRCLA_03604 | A0A1W0AB99 | A0A1W0A1J0 | Transmembrane protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.694 |
THRCLA_00715 | THRCLA_04672 | A0A1W0AB99 | A0A1V9ZYG6 | Transmembrane protein. | Nucleolar protein NOP5. | 0.875 |
THRCLA_00715 | THRCLA_04893 | A0A1W0AB99 | A0A1V9ZXU8 | Transmembrane protein. | rRNA-processing protein EBP2. | 0.955 |
THRCLA_00715 | THRCLA_07817 | A0A1W0AB99 | A0A1V9ZCB6 | Transmembrane protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.991 |
THRCLA_00715 | THRCLA_07963 | A0A1W0AB99 | A0A1V9ZBH9 | Transmembrane protein. | Nucleolar complex protein. | 0.829 |
THRCLA_00715 | THRCLA_09122 | A0A1W0AB99 | A0A1V9YZ74 | Transmembrane protein. | rRNA methyltransferase. | 0.974 |
THRCLA_00715 | THRCLA_09958 | A0A1W0AB99 | A0A1V9YTR0 | Transmembrane protein. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.828 |
THRCLA_00715 | THRCLA_10189 | A0A1W0AB99 | A0A1V9YS41 | Transmembrane protein. | Nucleolar complex protein 3. | 0.764 |
THRCLA_00715 | THRCLA_11153 | A0A1W0AB99 | A0A1V9Y8M9 | Transmembrane protein. | Drug/Metabolite Transporter (DMT) Superfamily. | 0.990 |
THRCLA_02642 | THRCLA_00715 | A0A1W0A4G5 | A0A1W0AB99 | Ribosome biogenesis protein RLP24. | Transmembrane protein. | 0.965 |
THRCLA_02642 | THRCLA_03604 | A0A1W0A4G5 | A0A1W0A1J0 | Ribosome biogenesis protein RLP24. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.988 |
THRCLA_02642 | THRCLA_04672 | A0A1W0A4G5 | A0A1V9ZYG6 | Ribosome biogenesis protein RLP24. | Nucleolar protein NOP5. | 0.825 |
THRCLA_02642 | THRCLA_04893 | A0A1W0A4G5 | A0A1V9ZXU8 | Ribosome biogenesis protein RLP24. | rRNA-processing protein EBP2. | 0.990 |
THRCLA_02642 | THRCLA_07817 | A0A1W0A4G5 | A0A1V9ZCB6 | Ribosome biogenesis protein RLP24. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.995 |
THRCLA_02642 | THRCLA_07963 | A0A1W0A4G5 | A0A1V9ZBH9 | Ribosome biogenesis protein RLP24. | Nucleolar complex protein. | 0.990 |
THRCLA_02642 | THRCLA_09122 | A0A1W0A4G5 | A0A1V9YZ74 | Ribosome biogenesis protein RLP24. | rRNA methyltransferase. | 0.977 |
THRCLA_02642 | THRCLA_09958 | A0A1W0A4G5 | A0A1V9YTR0 | Ribosome biogenesis protein RLP24. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.995 |
THRCLA_02642 | THRCLA_10189 | A0A1W0A4G5 | A0A1V9YS41 | Ribosome biogenesis protein RLP24. | Nucleolar complex protein 3. | 0.976 |
THRCLA_02642 | THRCLA_11153 | A0A1W0A4G5 | A0A1V9Y8M9 | Ribosome biogenesis protein RLP24. | Drug/Metabolite Transporter (DMT) Superfamily. | 0.995 |
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