STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_08765Myb-like DNA-binding protein. (456 aa)    
Predicted Functional Partners:
THRCLA_11776
DIRP domain-containing protein.
    
 0.740
THRCLA_03665
Histone-binding protein RBBP4.
    
 0.716
THRCLA_08546
Tesmin/TSO1-like CXC domain-containing protein.
    
 0.599
THRCLA_06143
Exosome complex exonuclease RRP41.
    
 0.599
THRCLA_04654
CRC domain-containing protein.
    
 0.599
THRCLA_03444
Uncharacterized protein.
    
 0.493
THRCLA_00495
rRNA biogenesis protein rrp5.
   
   0.490
THRCLA_08041
50S ribosomal protein L15.
    
 
 0.489
THRCLA_04583
50S ribosomal protein L3-2; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.489
THRCLA_05806
Uncharacterized protein.
    
 
 0.488
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.