STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_22320Eukaryotic translation initiation factor 6. (152 aa)    
Predicted Functional Partners:
THRCLA_10995
Ribosome maturation protein SBDS.
  
 
 0.991
THRCLA_23453
60S ribosomal protein L31.
  
 
 0.979
THRCLA_08277
60S ribosomal protein L30.
   
 
 0.965
THRCLA_21709
Ribosomal protein L34.
  
 
 0.963
THRCLA_00885
Ribosome biogenesis protein NSA2.
   
 
 0.959
THRCLA_09099
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.956
THRCLA_03606
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
  
 
 0.954
THRCLA_22381
60S ribosomal protein L26e.
  
 
 0.949
THRCLA_07846
60S ribosomal protein L8.
  
 
 0.948
THRCLA_04266
60S ribosomal protein L7.
  
 
 0.948
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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