STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_08182Glucanase; Belongs to the glycosyl hydrolase family 6. (1384 aa)    
Predicted Functional Partners:
THRCLA_04756
Importin subunit beta.
    
 0.989
THRCLA_02564
Uncharacterized protein.
     
 0.976
THRCLA_10933
Nuclear pore complex protein.
    
 0.876
THRCLA_01099
Uncharacterized protein.
    
 0.876
THRCLA_21339
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.851
THRCLA_23030
Sm domain-containing protein.
    
 0.765
THRCLA_02160
Small nuclear ribonucleoprotein-associated protein.
    
 0.765
THRCLA_08514
Uncharacterized protein.
    
 0.726
THRCLA_07454
Exportin-5.
    
 
 0.725
THRCLA_06349
Flagellar radial spoke protein.
    
 
 0.725
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.