STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THRCLA_08092Integrator complex subunit. (786 aa)    
Predicted Functional Partners:
THRCLA_04646
Integrator complex subunit.
    
 0.843
THRCLA_04699
Integrator complex subunit.
    
 0.841
THRCLA_02109
Acetyltransferase.
    
 0.841
THRCLA_22276
DNA-directed RNA polymerase II.
    
  0.797
THRCLA_08153
DNA-directed RNA polymerase II 36 kDa polypeptide A.
    
  0.797
THRCLA_22154
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.797
THRCLA_07702
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.797
THRCLA_01398
DNA-directed RNA polymerase I, II, and III subunit RPABC1.
    
  0.797
THRCLA_09145
RPOL4c domain-containing protein.
    
  0.796
THRCLA_23331
Uncharacterized protein.
    
  0.795
Your Current Organism:
Thraustotheca clavata
NCBI taxonomy Id: 74557
Other names: T. clavata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.